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Structural Bioinformatics T...
A large amount of structural data on biomacromolecules is available and the number of resolved structures is growing rapidly. This implies that we have an increasing opportunity to perform so far unprecedented analyses to obtain crucial biological insight. Biomacromolecular structural fragments such as binding sites or active sites, ligands, channels, pores, secondary structure motifs, etc., become very promising objects for these analyses because such fragments often serve as drug targets or drug templates, or substrate-specific pathways. However, such analyses are very challenging due to their complexity and, consequently, also because they require application of a combination of different software tools. In this book, we describe individual steps necessary for analysis of biomacromolecular fragments and provide a lsit of software tools required to perform such steps. For each step, we also show corresponding web-based tools in detail and provide a few practical examples of their usage
Monografía
monografia Rebiun18696249 https://catalogo.rebiun.org/rebiun/record/Rebiun18696249 cr c||||||||| 170124s2016 gw o 001 0 eng d 9783319473888 978-3-319-47388-8 10.1007/978-3-319-47388-8 doi CBUC 991037079969706706 UPVA 996893399903706 UAM 991007697315304211 UR0408187 UAL spa UAL rdc 610.28 23 Koca, Jaroslav Structural Bioinformatics Tools for Drug Design Extraction of Biologically Relevant Information from Structural Databases by Jaroslav Koca, Radka Svobodová Vareková, Lukás Pravda, Karel Berka, Stanislav Geidl, David Sehnal, Michal Otyepka Cham Springer International Publishing Imprint: Springer 2016 Cham Cham Springer International Publishing Imprint: Springer 1 recurso en línea 1 recurso en línea XIII, 144 p. 62 illus XIII, 144 p. 62 illus Texto (visual) isbdcontent electrónico isbdmedia Springer eBooks SpringerBriefs in Biochemistry and Molecular Biology 2211-9353 1. Introduction -- 2. Biomacromolecular fragments -- 3. Databases -- 4. Detection & Extraction -- a. Biomacromolecular fragments and structural patterns -- b. channels and pores -- 5. Validation -- 6. Characterization -- a. Partial atomic charges -- b. Channel characteristics -- 7. Selected Examples A large amount of structural data on biomacromolecules is available and the number of resolved structures is growing rapidly. This implies that we have an increasing opportunity to perform so far unprecedented analyses to obtain crucial biological insight. Biomacromolecular structural fragments such as binding sites or active sites, ligands, channels, pores, secondary structure motifs, etc., become very promising objects for these analyses because such fragments often serve as drug targets or drug templates, or substrate-specific pathways. However, such analyses are very challenging due to their complexity and, consequently, also because they require application of a combination of different software tools. In this book, we describe individual steps necessary for analysis of biomacromolecular fragments and provide a lsit of software tools required to perform such steps. For each step, we also show corresponding web-based tools in detail and provide a few practical examples of their usage Modo de acceso: World Wide Web Medicine Biomedical engineering Bioinformatics Biomedicine Biomedical Engineering/Biotechnology Bioinformatics Computational Biology/Bioinformatics Libros electrónicos Recursos electrónicos Svobodová Vareková, Radka Pravda, Lukás Berka, Karel Geidl, Stanislav Sehnal, David Otyepka, Michal SpringerLink (Online service)